J3_7NWH_031

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CAGUC*GUGCG*CGAUG

Length

15 nucleotides

Bulged bases

7NWH|1|5|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|5|C|451
7NWH|1|5|A|452
7NWH|1|5|G|453
7NWH|1|5|U|454
7NWH|1|5|C|455
*
7NWH|1|5|G|701
7NWH|1|5|U|702
7NWH|1|5|G|703
7NWH|1|5|C|704
7NWH|1|5|G|705
*
7NWH|1|5|C|1292
7NWH|1|5|G|1293
7NWH|1|5|A|1294
7NWH|1|5|U|1295
7NWH|1|5|G|1296

Current chains

Chain 5

28S Ribosomal RNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain e

Ribosomal protein L32

Chain f

eL33

Chain r

eL28