J3_7NWH_042
3D structure
- PDB id
- 7NWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 7NWH|1|9|A|1454, 7NWH|1|9|U|1477
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWH|1|9|C|1391
7NWH|1|9|U|1392
7NWH|1|9|G|1393
7NWH|1|9|G|1394
7NWH|1|9|C|1395
*
7NWH|1|9|G|1450
7NWH|1|9|G|1451
7NWH|1|9|A|1452
7NWH|1|9|C|1453
7NWH|1|9|A|1454
7NWH|1|9|A|1455
7NWH|1|9|G|1456
*
7NWH|1|9|C|1470
7NWH|1|9|C|1471
7NWH|1|9|C|1472
7NWH|1|9|G|1473
7NWH|1|9|A|1474
7NWH|1|9|G|1475
7NWH|1|9|A|1476
7NWH|1|9|U|1477
7NWH|1|9|U|1478
7NWH|1|9|G|1479
Current chains
- Chain 9
- 18S Ribosomal RNA
Nearby chains
- Chain DD
- 40S ribosomal protein S3
- Chain FF
- Ribosomal protein S5
- Chain QQ
- Ribosomal protein S16
- Chain RR
- 40S ribosomal protein S17
- Chain UU
- 40S ribosomal protein S20
- Chain cc
- 40S ribosomal protein S28
- Chain dd
- S29
- Chain gg
- Epididymis tissue sperm binding protein Li 3a
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