J3_7NWH_045

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

7NWH|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|5|A|2551
7NWH|1|5|G|2552
7NWH|1|5|A|2553
7NWH|1|5|U|2554
7NWH|1|5|G|2555
*
7NWH|1|5|C|2572
7NWH|1|5|A|2573
7NWH|1|5|G|2574
7NWH|1|5|U|2575
*
7NWH|1|5|A|2757
7NWH|1|5|G|2758
7NWH|1|5|G|2759
7NWH|1|5|G|2760
7NWH|1|5|U|2761
7NWH|1|5|G|2762
7NWH|1|5|U|2763
7NWH|1|5|A|2764
7NWH|1|5|A|2765
7NWH|1|5|A|2766
7NWH|1|5|U|2767

Current chains

Chain 5

28S Ribosomal RNA

Nearby chains

Chain Z

60S ribosomal protein L27