J3_7NWI_029
3D structure
- PDB id
- 7NWI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- CUGGC*GGAC*GAUUG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWI|1|9|C|1391
7NWI|1|9|U|1392
7NWI|1|9|G|1393
7NWI|1|9|G|1394
7NWI|1|9|C|1395
*
7NWI|1|9|G|1450
7NWI|1|9|G|1451
7NWI|1|9|A|1452
7NWI|1|9|C|1453
*
7NWI|1|9|G|1475
7NWI|1|9|A|1476
7NWI|1|9|U|1477
7NWI|1|9|U|1478
7NWI|1|9|G|1479
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain DD
- 40S ribosomal protein S3
- Chain FF
- Ribosomal protein S5
- Chain QQ
- Rps16 protein
- Chain RR
- S17
- Chain UU
- Ribosomal_S10 domain-containing protein
- Chain dd
- ribosomal protein uS14
- Chain gg
- ribosomal protein RACK1
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