3D structure

PDB id
7NWW (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
CUAAU*AGGUUAG*CAUAAG
Length
18 nucleotides
Bulged bases
7NWW|1|1|U|2334
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NWW|1|1|C|2295
7NWW|1|1|U|2296
7NWW|1|1|A|2297
7NWW|1|1|A|2298
7NWW|1|1|U|2299
*
7NWW|1|1|A|2317
7NWW|1|1|G|2318
7NWW|1|1|G|2319
7NWW|1|1|U|2320
7NWW|1|1|U|2321
7NWW|1|1|A|2322
7NWW|1|1|G|2323
*
7NWW|1|1|C|2332
7NWW|1|1|A|2333
7NWW|1|1|U|2334
7NWW|1|1|A|2335
7NWW|1|1|A|2336
7NWW|1|1|G|2337

Current chains

Chain 1
23S rRNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain F
50S ribosomal protein L5
Chain N
50S ribosomal protein L18
Chain V
50S ribosomal protein L27
Chain z
Transfer RNA; tRNA

Coloring options:

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