3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
UGAUCUA*UGG*CAAA
Length
14 nucleotides
Bulged bases
7O1A|1|BA|U|686, 7O1A|1|BA|A|792
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7O1A_016 not in the Motif Atlas
Homologous match to J3_5J7L_038
Geometric discrepancy: 0.0596
The information below is about J3_5J7L_038
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_64189.2
Basepair signature
cWW-tWH-cWW-tSW-F-F-cWW
Number of instances in this motif group
7

Unit IDs

7O1A|1|BA|U|683
7O1A|1|BA|G|684
7O1A|1|BA|A|685
7O1A|1|BA|U|686
7O1A|1|BA|C|687
7O1A|1|BA|U|688
7O1A|1|BA|A|689
*
7O1A|1|BA|U|773
7O1A|1|BA|G|774
7O1A|1|BA|G|775
*
7O1A|1|BA|C|791
7O1A|1|BA|A|792
7O1A|1|BA|A|793
7O1A|1|BA|A|794

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain B2
50S ribosomal protein L34
Chain BC
50S ribosomal protein L2

Coloring options:


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