3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CAUC*GUA*UUUAAAG
Length
14 nucleotides
Bulged bases
7O1A|1|BA|A|2518, 7O1A|1|BA|U|2519
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7O1A_024 not in the Motif Atlas
Homologous match to J3_5J7L_046
Geometric discrepancy: 0.0717
The information below is about J3_5J7L_046
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_32601.5
Basepair signature
cWW-tWH-cHW-F-cWW-tSS-F-cWW
Number of instances in this motif group
4

Unit IDs

7O1A|1|BA|C|2517
7O1A|1|BA|A|2518
7O1A|1|BA|U|2519
7O1A|1|BA|C|2520
*
7O1A|1|BA|G|2545
7O1A|1|BA|U|2546
7O1A|1|BA|A|2547
*
7O1A|1|BA|U|2561
7O1A|1|BA|U|2562
7O1A|1|BA|U|2563
7O1A|1|BA|A|2564
7O1A|1|BA|A|2565
7O1A|1|BA|A|2566
7O1A|1|BA|G|2567

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain BD
50S ribosomal protein L3
Chain BK
50S ribosomal protein L14

Coloring options:


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