J3_7O1A_035

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

7O1A|1|BA|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7O1A_035 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0492

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7O1A|1|BA|G|297
7O1A|1|BA|G|298
7O1A|1|BA|A|299
7O1A|1|BA|A|300
7O1A|1|BA|G|301
*
7O1A|1|BA|C|316
7O1A|1|BA|G|317
7O1A|1|BA|C|318
7O1A|1|BA|G|319
7O1A|1|BA|A|320
7O1A|1|BA|U|321
7O1A|1|BA|A|322
7O1A|1|BA|C|323
7O1A|1|BA|A|324
7O1A|1|BA|G|325
*
7O1A|1|BA|C|337
7O1A|1|BA|G|338
7O1A|1|BA|U|339
7O1A|1|BA|A|340
7O1A|1|BA|C|341

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BU

50S ribosomal protein L24