J3_7O5B_026
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- UCC*GUUGAU*AAUCGA
- Length
- 15 nucleotides
- Bulged bases
- 7O5B|1|X|U|2858, 7O5B|1|X|A|2860
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O5B|1|X|U|2838
7O5B|1|X|C|2839
7O5B|1|X|C|2840
*
7O5B|1|X|G|2856
7O5B|1|X|U|2857
7O5B|1|X|U|2858
7O5B|1|X|G|2859
7O5B|1|X|A|2860
7O5B|1|X|U|2861
*
7O5B|1|X|A|2907
7O5B|1|X|A|2908
7O5B|1|X|U|2909
7O5B|1|X|C|2910
7O5B|1|X|G|2911
7O5B|1|X|A|2912
Current chains
- Chain X
- 23S rRNA (2887-MER)
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain W
- Large signal recognition particle RNA; LSRP RNA
- Chain a
- 50S ribosomal protein L3
- Chain k
- 50S ribosomal protein L17
- Chain r
- 50S ribosomal protein L22
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