J3_7O5B_030
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- CAAG*CUAGUAA*UGAAUACG
- Length
- 19 nucleotides
- Bulged bases
- 7O5B|1|A|U|1354, 7O5B|1|A|A|1355, 7O5B|1|A|A|1384, 7O5B|1|A|U|1385, 7O5B|1|A|A|1386, 7O5B|1|A|C|1387
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O5B|1|A|C|946
7O5B|1|A|A|947
7O5B|1|A|A|948
7O5B|1|A|G|949
*
7O5B|1|A|C|1353
7O5B|1|A|U|1354
7O5B|1|A|A|1355
7O5B|1|A|G|1356
7O5B|1|A|U|1357
7O5B|1|A|A|1358
7O5B|1|A|A|1359
*
7O5B|1|A|U|1381
7O5B|1|A|G|1382
7O5B|1|A|A|1383
7O5B|1|A|A|1384
7O5B|1|A|U|1385
7O5B|1|A|A|1386
7O5B|1|A|C|1387
7O5B|1|A|G|1388
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
Coloring options: