J3_7O5B_031
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- GUUUAAUUC*GAAGAACCUUAC*GGCUAC
- Length
- 27 nucleotides
- Bulged bases
- 7O5B|1|A|A|985, 7O5B|1|A|G|986, 7O5B|1|A|A|988
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O5B|1|A|G|964
7O5B|1|A|U|965
7O5B|1|A|U|966
7O5B|1|A|U|967
7O5B|1|A|A|968
7O5B|1|A|A|969
7O5B|1|A|U|970
7O5B|1|A|U|971
7O5B|1|A|C|972
*
7O5B|1|A|G|983
7O5B|1|A|A|984
7O5B|1|A|A|985
7O5B|1|A|G|986
7O5B|1|A|A|987
7O5B|1|A|A|988
7O5B|1|A|C|989
7O5B|1|A|C|990
7O5B|1|A|U|991
7O5B|1|A|U|992
7O5B|1|A|A|993
7O5B|1|A|C|994
*
7O5B|1|A|G|1230
7O5B|1|A|G|1231
7O5B|1|A|C|1232
7O5B|1|A|U|1233
7O5B|1|A|A|1234
7O5B|1|A|C|1235
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain J
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S13
- Chain N
- 30S ribosomal protein S14
- Chain S
- 30S ribosomal protein S19
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