3D structure

PDB id
7O9K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-Tu
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CUAG*CAAUAGAUAUAGUAC*GGAAAG
Length
25 nucleotides
Bulged bases
7O9K|1|A|U|1774
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7O9K|1|A|C|1678
7O9K|1|A|U|1679
7O9K|1|A|A|1680
7O9K|1|A|G|1681
*
7O9K|1|A|C|1771
7O9K|1|A|A|1772
7O9K|1|A|A|1773
7O9K|1|A|U|1774
7O9K|1|A|A|1775
7O9K|1|A|G|1776
7O9K|1|A|A|1777
7O9K|1|A|U|1778
7O9K|1|A|A|1779
7O9K|1|A|U|1780
7O9K|1|A|A|1781
7O9K|1|A|G|1782
7O9K|1|A|U|1783
7O9K|1|A|A|1784
7O9K|1|A|C|1785
*
7O9K|1|A|G|1792
7O9K|1|A|G|1793
7O9K|1|A|A|1794
7O9K|1|A|A|1795
7O9K|1|A|A|1796
7O9K|1|A|G|1797

Current chains

Chain A
16S rRNA

Nearby chains

Chain 2
39S ribosomal protein L34, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain F
39S ribosomal protein L4, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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