J3_7O9K_007

3D structure

PDB id

7O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-Tu

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGCCCA*UUG*CCUGUAUGAAUG

Length

22 nucleotides

Bulged bases

7O9K|1|A|C|2548, 7O9K|1|A|U|2626, 7O9K|1|A|G|2627, 7O9K|1|A|A|2633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O9K|1|A|C|2544
7O9K|1|A|U|2545
7O9K|1|A|G|2546
7O9K|1|A|C|2547
7O9K|1|A|C|2548
7O9K|1|A|C|2549
7O9K|1|A|A|2550
*
7O9K|1|A|U|2606
7O9K|1|A|U|2607
7O9K|1|A|G|2608
*
7O9K|1|A|C|2624
7O9K|1|A|C|2625
7O9K|1|A|U|2626
7O9K|1|A|G|2627
7O9K|1|A|U|2628
7O9K|1|A|A|2629
7O9K|1|A|U|2630
7O9K|1|A|G|2631
7O9K|1|A|A|2632
7O9K|1|A|A|2633
7O9K|1|A|U|2634
7O9K|1|A|G|2635

Current chains

Chain A

16S rRNA

Nearby chains

Chain A2

Transcription termination factor 4, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial