J3_7ODR_004

3D structure

PDB id

7ODR (explore in PDB, NAKB, or RNA 3D Hub)

Description

State A of the human mitoribosomal large subunit assembly intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAAGCCUG*CAACC*GCA

Length

16 nucleotides

Bulged bases

7ODR|1|A|A|2425

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ODR|1|A|U|2336
7ODR|1|A|A|2337
7ODR|1|A|A|2338
7ODR|1|A|G|2339
7ODR|1|A|C|2340
7ODR|1|A|C|2341
7ODR|1|A|U|2342
7ODR|1|A|G|2343
*
7ODR|1|A|C|2423
7ODR|1|A|A|2424
7ODR|1|A|A|2425
7ODR|1|A|C|2426
7ODR|1|A|C|2427
*
7ODR|1|A|G|2436
7ODR|1|A|C|2437
7ODR|1|A|A|2438

Current chains

Chain A

16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNA

Nearby chains

Chain 2

39S ribosomal protein L34, mitochondrial

Chain 9

39S ribosomal protein L41, mitochondrial

Chain U

39S ribosomal protein L23, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial