J3_7ODR_007
3D structure
- PDB id
- 7ODR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State A of the human mitoribosomal large subunit assembly intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCAAACCCACUCCACCUUACUACCAGACAACCUUAGCCA*UUACCCAAAUAAAGUAU*AGAAAUUGAAACCUG
- Length
- 71 nucleotides
- Bulged bases
- 7ODR|1|A|C|1693, 7ODR|1|A|C|1699, 7ODR|1|A|U|1701, 7ODR|1|A|C|1707, 7ODR|1|A|A|1708, 7ODR|1|A|C|1715, 7ODR|1|A|U|1716, 7ODR|1|A|C|1764
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ODR|1|A|C|1684
7ODR|1|A|C|1685
7ODR|1|A|A|1686
7ODR|1|A|A|1687
7ODR|1|A|A|1688
7ODR|1|A|C|1689
7ODR|1|A|C|1690
7ODR|1|A|C|1691
7ODR|1|A|A|1692
7ODR|1|A|C|1693
7ODR|1|A|U|1694
7ODR|1|A|C|1695
7ODR|1|A|C|1696
7ODR|1|A|A|1697
7ODR|1|A|C|1698
7ODR|1|A|C|1699
7ODR|1|A|U|1700
7ODR|1|A|U|1701
7ODR|1|A|A|1702
7ODR|1|A|C|1703
7ODR|1|A|U|1704
7ODR|1|A|A|1705
7ODR|1|A|C|1706
7ODR|1|A|C|1707
7ODR|1|A|A|1708
7ODR|1|A|G|1709
7ODR|1|A|A|1710
7ODR|1|A|C|1711
7ODR|1|A|A|1712
7ODR|1|A|A|1713
7ODR|1|A|C|1714
7ODR|1|A|C|1715
7ODR|1|A|U|1716
7ODR|1|A|U|1717
7ODR|1|A|A|1718
7ODR|1|A|G|1719
7ODR|1|A|C|1720
7ODR|1|A|C|1721
7ODR|1|A|A|1722
*
7ODR|1|A|U|1729
7ODR|1|A|U|1730
7ODR|1|A|A|1731
7ODR|1|A|C|1732
7ODR|1|A|C|1733
7ODR|1|A|C|1734
7ODR|1|A|A|1735
7ODR|1|A|A|1736
7ODR|1|A|A|1737
7ODR|1|A|U|1738
7ODR|1|A|A|1739
7ODR|1|A|A|1740
7ODR|1|A|A|1741
7ODR|1|A|G|1742
7ODR|1|A|U|1743
7ODR|1|A|A|1744
7ODR|1|A|U|1745
*
7ODR|1|A|A|1753
7ODR|1|A|G|1754
7ODR|1|A|A|1755
7ODR|1|A|A|1756
7ODR|1|A|A|1757
7ODR|1|A|U|1758
7ODR|1|A|U|1759
7ODR|1|A|G|1760
7ODR|1|A|A|1761
7ODR|1|A|A|1762
7ODR|1|A|A|1763
7ODR|1|A|C|1764
7ODR|1|A|C|1765
7ODR|1|A|U|1766
7ODR|1|A|G|1767
Current chains
- Chain A
- 16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain 5
- 39S ribosomal protein L37, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain H
- 39S ribosomal protein L9, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain V
- 39S ribosomal protein L24, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: