J3_7ODS_001

3D structure

PDB id

7ODS (explore in PDB, NAKB, or RNA 3D Hub)

Description

State B of the human mitoribosomal large subunit assembly intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUAG*CAAUAGAUAUAGUAC*GGAAAG

Length

25 nucleotides

Bulged bases

7ODS|1|A|U|1774

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ODS|1|A|C|1678
7ODS|1|A|U|1679
7ODS|1|A|A|1680
7ODS|1|A|G|1681
*
7ODS|1|A|C|1771
7ODS|1|A|A|1772
7ODS|1|A|A|1773
7ODS|1|A|U|1774
7ODS|1|A|A|1775
7ODS|1|A|G|1776
7ODS|1|A|A|1777
7ODS|1|A|U|1778
7ODS|1|A|A|1779
7ODS|1|A|U|1780
7ODS|1|A|A|1781
7ODS|1|A|G|1782
7ODS|1|A|U|1783
7ODS|1|A|A|1784
7ODS|1|A|C|1785
*
7ODS|1|A|G|1792
7ODS|1|A|G|1793
7ODS|1|A|A|1794
7ODS|1|A|A|1795
7ODS|1|A|A|1796
7ODS|1|A|G|1797

Current chains

Chain A

16S mitochondrial rRNA, DNA (30-MER),16S mitochondrial rRNA

Nearby chains

Chain 2

39S ribosomal protein L34, mitochondrial

Chain 9

39S ribosomal protein L41, mitochondrial

Chain F

39S ribosomal protein L4, mitochondrial

Chain R

39S ribosomal protein L20, mitochondrial

Chain U

39S ribosomal protein L23, mitochondrial

Chain V

39S ribosomal protein L24, mitochondrial

Chain Y

39S ribosomal protein L47, mitochondrial

Chain c

39S ribosomal protein L44, mitochondrial

Chain i

39S ribosomal protein L51, mitochondrial