J3_7ODT_008
3D structure
- PDB id
- 7ODT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State C of the human mitoribosomal large subunit assembly intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCA*UCAAUUGAUCC*GACCAAC
- Length
- 21 nucleotides
- Bulged bases
- 7ODT|1|A|U|2895, 7ODT|1|A|A|2914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ODT|1|A|G|2846
7ODT|1|A|C|2847
7ODT|1|A|A|2848
*
7ODT|1|A|U|2890
7ODT|1|A|C|2891
7ODT|1|A|A|2892
7ODT|1|A|A|2893
7ODT|1|A|U|2894
7ODT|1|A|U|2895
7ODT|1|A|G|2896
7ODT|1|A|A|2897
7ODT|1|A|U|2898
7ODT|1|A|C|2899
7ODT|1|A|C|2900
*
7ODT|1|A|G|2909
7ODT|1|A|A|2910
7ODT|1|A|C|2911
7ODT|1|A|C|2912
7ODT|1|A|A|2913
7ODT|1|A|A|2914
7ODT|1|A|C|2915
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 1
- 39S ribosomal protein L33, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
- Chain x
- 5-methylcytosine rRNA methyltransferase NSUN4
Coloring options: