J3_7OF0_001

3D structure

PDB id

7OF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUAG*CAAUAGAUAUAGUAC*GGAAAG

Length

25 nucleotides

Bulged bases

7OF0|1|A|U|1774

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OF0|1|A|C|1678
7OF0|1|A|U|1679
7OF0|1|A|A|1680
7OF0|1|A|G|1681
*
7OF0|1|A|C|1771
7OF0|1|A|A|1772
7OF0|1|A|A|1773
7OF0|1|A|U|1774
7OF0|1|A|A|1775
7OF0|1|A|G|1776
7OF0|1|A|A|1777
7OF0|1|A|U|1778
7OF0|1|A|A|1779
7OF0|1|A|U|1780
7OF0|1|A|A|1781
7OF0|1|A|G|1782
7OF0|1|A|U|1783
7OF0|1|A|A|1784
7OF0|1|A|C|1785
*
7OF0|1|A|G|1792
7OF0|1|A|G|1793
7OF0|1|A|A|1794
7OF0|1|A|A|1795
7OF0|1|A|A|1796
7OF0|1|A|G|1797

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain 2

39S ribosomal protein L34, mitochondrial

Chain 9

39S ribosomal protein L41, mitochondrial

Chain F

39S ribosomal protein L4, mitochondrial

Chain R

39S ribosomal protein L20, mitochondrial

Chain U

39S ribosomal protein L23, mitochondrial

Chain Y

39S ribosomal protein L47, mitochondrial

Chain c

39S ribosomal protein L44, mitochondrial

Chain d

39S ribosomal protein L45, mitochondrial

Chain i

39S ribosomal protein L51, mitochondrial