3D structure

PDB id
7OF2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
CUAG*CAAUAGAUAUAGUAC*GGAAAG
Length
25 nucleotides
Bulged bases
7OF2|1|A|U|1774
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OF2|1|A|C|1678
7OF2|1|A|U|1679
7OF2|1|A|A|1680
7OF2|1|A|G|1681
*
7OF2|1|A|C|1771
7OF2|1|A|A|1772
7OF2|1|A|A|1773
7OF2|1|A|U|1774
7OF2|1|A|A|1775
7OF2|1|A|G|1776
7OF2|1|A|A|1777
7OF2|1|A|U|1778
7OF2|1|A|A|1779
7OF2|1|A|U|1780
7OF2|1|A|A|1781
7OF2|1|A|G|1782
7OF2|1|A|U|1783
7OF2|1|A|A|1784
7OF2|1|A|C|1785
*
7OF2|1|A|G|1792
7OF2|1|A|G|1793
7OF2|1|A|A|1794
7OF2|1|A|A|1795
7OF2|1|A|A|1796
7OF2|1|A|G|1797

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain 2
39S ribosomal protein L34, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain F
39S ribosomal protein L4, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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