J3_7OF5_005

3D structure

PDB id

7OF5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCG*CAAUUAAC*GUC

Length

14 nucleotides

Bulged bases

7OF5|1|A|C|2344, 7OF5|1|A|U|2372

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OF5|1|A|G|2343
7OF5|1|A|C|2344
7OF5|1|A|G|2345
*
7OF5|1|A|C|2368
7OF5|1|A|A|2369
7OF5|1|A|A|2370
7OF5|1|A|U|2371
7OF5|1|A|U|2372
7OF5|1|A|A|2373
7OF5|1|A|A|2374
7OF5|1|A|C|2375
*
7OF5|1|A|G|2421
7OF5|1|A|U|2422
7OF5|1|A|C|2423

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain 9

39S ribosomal protein L41, mitochondrial

Chain U

39S ribosomal protein L23, mitochondrial

Chain Y

39S ribosomal protein L47, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial