3D structure

PDB id
7OF7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
CUAG*CAAUAGAUAUAGUAC*GGAAAG
Length
25 nucleotides
Bulged bases
7OF7|1|A|U|1774
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OF7|1|A|C|1678
7OF7|1|A|U|1679
7OF7|1|A|A|1680
7OF7|1|A|G|1681
*
7OF7|1|A|C|1771
7OF7|1|A|A|1772
7OF7|1|A|A|1773
7OF7|1|A|U|1774
7OF7|1|A|A|1775
7OF7|1|A|G|1776
7OF7|1|A|A|1777
7OF7|1|A|U|1778
7OF7|1|A|A|1779
7OF7|1|A|U|1780
7OF7|1|A|A|1781
7OF7|1|A|G|1782
7OF7|1|A|U|1783
7OF7|1|A|A|1784
7OF7|1|A|C|1785
*
7OF7|1|A|G|1792
7OF7|1|A|G|1793
7OF7|1|A|A|1794
7OF7|1|A|A|1795
7OF7|1|A|A|1796
7OF7|1|A|G|1797

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain 2
39S ribosomal protein L34, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain F
39S ribosomal protein L4, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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