J3_7OF7_004

3D structure

PDB id

7OF7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UAAGCCUG*CAACC*GCA

Length

16 nucleotides

Bulged bases

7OF7|1|A|A|2425

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OF7|1|A|U|2336
7OF7|1|A|A|2337
7OF7|1|A|A|2338
7OF7|1|A|G|2339
7OF7|1|A|C|2340
7OF7|1|A|C|2341
7OF7|1|A|U|2342
7OF7|1|A|G|2343
*
7OF7|1|A|C|2423
7OF7|1|A|A|2424
7OF7|1|A|A|2425
7OF7|1|A|C|2426
7OF7|1|A|C|2427
*
7OF7|1|A|G|2436
7OF7|1|A|C|2437
7OF7|1|A|A|2438

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain 2

39S ribosomal protein L34, mitochondrial

Chain 9

39S ribosomal protein L41, mitochondrial

Chain U

39S ribosomal protein L23, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial