J3_7OH3_023

3D structure

PDB id

7OH3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CA*UAACUGAAU*AGGAAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OH3|1|1|C|1631
7OH3|1|1|A|1632
*
7OH3|1|1|U|1641
7OH3|1|1|A|1642
7OH3|1|1|A|1643
7OH3|1|1|C|1644
7OH3|1|1|U|1645
7OH3|1|1|G|1646
7OH3|1|1|A|1647
7OH3|1|1|A|1648
7OH3|1|1|U|1649
*
7OH3|1|1|A|1806
7OH3|1|1|G|1807
7OH3|1|1|G|1808
7OH3|1|1|A|1809
7OH3|1|1|A|1810
7OH3|1|1|G|1811

Current chains

Chain 1

25S rRNA

Nearby chains

Chain A

60S ribosomal protein L2-A

Chain G

60S ribosomal protein L8-A

Chain Z

60S ribosomal protein L27-A

Chain g

60S ribosomal protein L34-A

Chain k

60S ribosomal protein L38