J3_7OHP_005

3D structure

PDB id

7OHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CAUUUG*CUUAGAUG*CUG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHP|1|1|C|3298
7OHP|1|1|A|3299
7OHP|1|1|U|3300
7OHP|1|1|U|3301
7OHP|1|1|U|3302
7OHP|1|1|G|3303
*
7OHP|1|1|C|3311
7OHP|1|1|U|3312
7OHP|1|1|U|3313
7OHP|1|1|A|3314
7OHP|1|1|G|3315
7OHP|1|1|A|3316
7OHP|1|1|U|3317
7OHP|1|1|G|3318
*
7OHP|1|1|C|3388
7OHP|1|1|U|3389
7OHP|1|1|G|3390

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3