J3_7OHV_005

3D structure

PDB id

7OHV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGAAG*CAA*UCUA

Length

12 nucleotides

Bulged bases

7OHV|1|1|A|1482

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHV|1|1|U|1479
7OHV|1|1|G|1480
7OHV|1|1|A|1481
7OHV|1|1|A|1482
7OHV|1|1|G|1485
*
7OHV|1|1|C|1857
7OHV|1|1|A|1858
7OHV|1|1|A|1859
*
7OHV|1|1|U|1871
7OHV|1|1|C|1872
7OHV|1|1|U|1873
7OHV|1|1|A|1874

Current chains

Chain 1

25S rRNA

Nearby chains

Chain R

60S ribosomal protein L19-A