J3_7OI0_007

3D structure

PDB id

7OI0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta rbfA pre-30S ribosomal subunit class D

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GUA*UACCGGUGG*CGGCC

Length

17 nucleotides

Bulged bases

7OI0|1|A|U|723

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OI0|1|A|G|671
7OI0|1|A|U|672
7OI0|1|A|A|673
*
7OI0|1|A|U|717
7OI0|1|A|A|718
7OI0|1|A|C|719
7OI0|1|A|C|720
7OI0|1|A|G|721
7OI0|1|A|G|722
7OI0|1|A|U|723
7OI0|1|A|G|724
7OI0|1|A|G|725
*
7OI0|1|A|C|732
7OI0|1|A|G|733
7OI0|1|A|G|734
7OI0|1|A|C|735
7OI0|1|A|C|736

Current chains

Chain A

16S rRNA

Nearby chains

Chain F

30S ribosomal protein S6, fully modified isoform

Chain O

30S ribosomal protein S15

Chain R

30S ribosomal protein S18