J3_7OIG_029

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

7OIG|1|1|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7OIG_029 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0537

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7OIG|1|1|G|297
7OIG|1|1|G|298
7OIG|1|1|A|299
7OIG|1|1|A|300
7OIG|1|1|G|301
*
7OIG|1|1|C|316
7OIG|1|1|G|317
7OIG|1|1|C|318
7OIG|1|1|G|319
7OIG|1|1|A|320
7OIG|1|1|U|321
7OIG|1|1|A|322
7OIG|1|1|C|323
7OIG|1|1|A|324
7OIG|1|1|G|325
*
7OIG|1|1|C|337
7OIG|1|1|G|338
7OIG|1|1|U|339
7OIG|1|1|A|340
7OIG|1|1|C|341

Current chains

Chain 1

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain T

50S ribosomal protein L24