3D structure

PDB id
7OII (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-70 cotranslational folding intermediate 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CUAAU*AGGUUAG*CAUAAG
Length
18 nucleotides
Bulged bases
7OII|1|1|U|2334, 7OII|1|1|A|2336
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OII|1|1|C|2295
7OII|1|1|U|2296
7OII|1|1|A|2297
7OII|1|1|A|2298
7OII|1|1|U|2299
*
7OII|1|1|A|2317
7OII|1|1|G|2318
7OII|1|1|G|2319
7OII|1|1|U|2320
7OII|1|1|U|2321
7OII|1|1|A|2322
7OII|1|1|G|2323
*
7OII|1|1|C|2332
7OII|1|1|A|2333
7OII|1|1|U|2334
7OII|1|1|A|2335
7OII|1|1|A|2336
7OII|1|1|G|2337

Current chains

Chain 1
23S rRNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain F
50S ribosomal protein L5
Chain N
50S ribosomal protein L18
Chain V
50S ribosomal protein L27
Chain z
Transfer RNA; tRNA

Coloring options:

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