J3_7OLC_005

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUAG*CGCAGC*GUCAAAU

Length

17 nucleotides

Bulged bases

7OLC|1|1|A|878

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLC|1|1|A|810
7OLC|1|1|U|811
7OLC|1|1|A|812
7OLC|1|1|G|813
*
7OLC|1|1|C|845
7OLC|1|1|G|846
7OLC|1|1|C|847
7OLC|1|1|A|848
7OLC|1|1|G|849
7OLC|1|1|C|850
*
7OLC|1|1|G|873
7OLC|1|1|U|874
7OLC|1|1|C|875
7OLC|1|1|A|876
7OLC|1|1|A|877
7OLC|1|1|A|878
7OLC|1|1|U|879

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LA

60S ribosomal protein L2-like protein

Chain LR

Ribosomal protein L19

Chain Lg

Ribosomal protein l34-like protein

Chain Lj

Ribosomal protein L37