J3_7OLC_054
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AC*GAUAAGUAA*UCGAAUCU
- Length
- 19 nucleotides
- Bulged bases
- 7OLC|1|4|U|60, 7OLC|1|4|A|62, 7OLC|1|4|G|95
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OLC|1|4|A|44
7OLC|1|4|C|45
*
7OLC|1|4|G|58
7OLC|1|4|A|59
7OLC|1|4|U|60
7OLC|1|4|A|61
7OLC|1|4|A|62
7OLC|1|4|G|63
7OLC|1|4|U|64
7OLC|1|4|A|65
7OLC|1|4|A|66
*
7OLC|1|4|U|93
7OLC|1|4|C|94
7OLC|1|4|G|95
7OLC|1|4|A|96
7OLC|1|4|A|97
7OLC|1|4|U|98
7OLC|1|4|C|99
7OLC|1|4|U|100
Current chains
- Chain 4
- 5.8S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LX
- 60S ribosomal protein L25-like protein
- Chain LY
- 60S ribosomal protein L26-like protein
- Chain Lh
- Dolichyl-diphosphooligosaccharide--protein glycotransferase
- Chain Lj
- Ribosomal protein L37
- Chain Ll
- eL39
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