J3_7OPE_010
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUG*CUAACC*GAGACAG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OPE_010 not in the Motif Atlas
- Homologous match to J3_4WF9_007
- Geometric discrepancy: 0.1321
- The information below is about J3_4WF9_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07703.1
- Basepair signature
- cWW-cWW-tSH-F-F-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
7OPE|1|A|U|2120
7OPE|1|A|U|2121
7OPE|1|A|G|2122
*
7OPE|1|A|C|2225
7OPE|1|A|U|2226
7OPE|1|A|A|2227
7OPE|1|A|A|2228
7OPE|1|A|C|2229
7OPE|1|A|C|2230
*
7OPE|1|A|G|2251
7OPE|1|A|A|2252
7OPE|1|A|G|2253
7OPE|1|A|A|2254
7OPE|1|A|C|2255
7OPE|1|A|A|2256
7OPE|1|A|G|2257
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L2
- Chain b
- 50S ribosomal protein L28
Coloring options: