J3_7OTC_023

3D structure

PDB id

7OTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAG*UGUGCC*GAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OTC|1|a|G|1003
7OTC|1|a|A|1004
7OTC|1|a|A|1005
7OTC|1|a|G|1006
*
7OTC|1|a|U|1023
7OTC|1|a|G|1024
7OTC|1|a|U|1025
7OTC|1|a|G|1026
7OTC|1|a|C|1027
7OTC|1|a|C|1028
*
7OTC|1|a|G|1034
7OTC|1|a|A|1035
7OTC|1|a|A|1036
7OTC|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain n

30S ribosomal protein S14