J3_7P2E_003

3D structure

PDB id

7P2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CU*AAUAGAC*GG

Length

11 nucleotides

Bulged bases

7P2E|1|A|A|1019

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7P2E|1|A|C|973
7P2E|1|A|U|974
*
7P2E|1|A|A|1014
7P2E|1|A|A|1015
7P2E|1|A|U|1016
7P2E|1|A|A|1017
7P2E|1|A|G|1018
7P2E|1|A|A|1019
7P2E|1|A|C|1020
*
7P2E|1|A|G|1030
7P2E|1|A|G|1031

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain E

28S ribosomal protein S6, mitochondrial

Chain I

28S ribosomal protein S11, mitochondrial

Chain P

28S ribosomal protein S18c, mitochondrial

Chain Q

28S ribosomal protein S21, mitochondrial