J3_7P48_018

3D structure

PDB id

7P48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus ribosome in complex with Sal(B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGGAG*CUAC*GGAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7P48|1|a|U|952
7P48|1|a|G|953
7P48|1|a|G|954
7P48|1|a|A|955
7P48|1|a|G|956
*
7P48|1|a|C|1244
7P48|1|a|U|1245
7P48|1|a|A|1246
7P48|1|a|C|1247
*
7P48|1|a|G|1347
7P48|1|a|G|1348
7P48|1|a|A|1349
7P48|1|a|A|1350

Current chains

Chain a

16S rRNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain 6

ABC-F type ribosomal protection protein

Chain i

30S ribosomal protein S9

Chain m

30S ribosomal protein S13