J3_7P7Q_003

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CAAAC*GGGUUGUA*UG

Length

15 nucleotides

Bulged bases

7P7Q|1|A|U|300

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7P7Q_003 not in the Motif Atlas

Homologous match to J3_7RQB_003

Geometric discrepancy: 0.1233

The information below is about J3_7RQB_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_97921.1

Basepair signature

cWW-F-F-tSH-tWH-F-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

7P7Q|1|A|C|271
7P7Q|1|A|A|272
7P7Q|1|A|A|273
7P7Q|1|A|A|274
7P7Q|1|A|C|275
*
7P7Q|1|A|G|294
7P7Q|1|A|G|295
7P7Q|1|A|G|296
7P7Q|1|A|U|297
7P7Q|1|A|U|298
7P7Q|1|A|G|299
7P7Q|1|A|U|300
7P7Q|1|A|A|301
*
7P7Q|1|A|U|408
7P7Q|1|A|G|409

Current chains

Chain A

23S rRNA

Nearby chains