J3_7P7Q_004
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UGAUCUA*UAG*CGAA
- Length
- 14 nucleotides
- Bulged bases
- 7P7Q|1|A|U|725
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P7Q_004 not in the Motif Atlas
- Homologous match to J3_5J7L_038
- Geometric discrepancy: 0.0775
- The information below is about J3_5J7L_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_64189.2
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7P7Q|1|A|U|722
7P7Q|1|A|G|723
7P7Q|1|A|A|724
7P7Q|1|A|U|725
7P7Q|1|A|C|726
7P7Q|1|A|U|727
7P7Q|1|A|A|728
*
7P7Q|1|A|U|812
7P7Q|1|A|A|813
7P7Q|1|A|G|814
*
7P7Q|1|A|C|830
7P7Q|1|A|G|831
7P7Q|1|A|A|832
7P7Q|1|A|A|833
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
- Chain G
- 50S ribosomal protein L2
- Chain I
- 50S ribosomal protein L4
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