J3_7P7Q_005
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CAG*CGAAC*GAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P7Q_005 not in the Motif Atlas
- Homologous match to J3_7RQB_005
- Geometric discrepancy: 0.0531
- The information below is about J3_7RQB_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44724.4
- Basepair signature
- cWW-tSH-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
7P7Q|1|A|C|737
7P7Q|1|A|A|738
7P7Q|1|A|G|739
*
7P7Q|1|A|C|771
7P7Q|1|A|G|772
7P7Q|1|A|A|773
7P7Q|1|A|A|774
7P7Q|1|A|C|775
*
7P7Q|1|A|G|799
7P7Q|1|A|A|800
7P7Q|1|A|U|801
7P7Q|1|A|G|802
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L2
Coloring options: