J3_7P7Q_019
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CAAG*CUAGUAA*UGAAUACG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P7Q_019 not in the Motif Atlas
- Homologous match to J3_4LFB_002
- Geometric discrepancy: 0.061
- The information below is about J3_4LFB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85722.2
- Basepair signature
- cWW-F-F-cSS-F-cWW-tHH-tWW-F-tWH-tHS-cSH-cWW
- Number of instances in this motif group
- 6
Unit IDs
7P7Q|1|a|C|963
7P7Q|1|a|A|964
7P7Q|1|a|A|965
7P7Q|1|a|G|966
*
7P7Q|1|a|C|1370
7P7Q|1|a|U|1371
7P7Q|1|a|A|1372
7P7Q|1|a|G|1373
7P7Q|1|a|U|1374
7P7Q|1|a|A|1375
7P7Q|1|a|A|1376
*
7P7Q|1|a|U|1398
7P7Q|1|a|G|1399
7P7Q|1|a|A|1400
7P7Q|1|a|A|1401
7P7Q|1|a|U|1402
7P7Q|1|a|A|1403
7P7Q|1|a|C|1404
7P7Q|1|a|G|1405
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain h
- 30S ribosomal protein S7
- Chain j
- 30S ribosomal protein S9
Coloring options: