J3_7P7Q_037
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUAUG
- Length
- 18 nucleotides
- Bulged bases
- 7P7Q|1|a|U|1238, 7P7Q|1|a|U|1240
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P7Q_037 not in the Motif Atlas
- Homologous match to J3_5J7L_053
- Geometric discrepancy: 0.0924
- The information below is about J3_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.2
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7P7Q|1|a|C|1017
7P7Q|1|a|U|1018
7P7Q|1|a|U|1019
7P7Q|1|a|G|1020
7P7Q|1|a|A|1021
7P7Q|1|a|C|1022
7P7Q|1|a|A|1023
7P7Q|1|a|U|1024
*
7P7Q|1|a|A|1071
7P7Q|1|a|C|1072
7P7Q|1|a|A|1073
7P7Q|1|a|G|1074
*
7P7Q|1|a|C|1236
7P7Q|1|a|U|1237
7P7Q|1|a|U|1238
7P7Q|1|a|A|1239
7P7Q|1|a|U|1240
7P7Q|1|a|G|1241
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain o
- 30S ribosomal protein S14 type Z
Coloring options: