J3_7PJT_030

3D structure

PDB id

7PJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

GUGAUCUA*UGGGG*CAAUCAAAC

Length

22 nucleotides

Bulged bases

7PJT|1|A|U|686, 7PJT|1|A|A|789, 7PJT|1|A|U|790, 7PJT|1|A|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJT|1|A|G|682
7PJT|1|A|U|683
7PJT|1|A|G|684
7PJT|1|A|A|685
7PJT|1|A|U|686
7PJT|1|A|C|687
7PJT|1|A|U|688
7PJT|1|A|A|689
*
7PJT|1|A|U|773
7PJT|1|A|G|774
7PJT|1|A|G|775
7PJT|1|A|G|776
7PJT|1|A|G|777
*
7PJT|1|A|C|787
7PJT|1|A|A|788
7PJT|1|A|A|789
7PJT|1|A|U|790
7PJT|1|A|C|791
7PJT|1|A|A|792
7PJT|1|A|A|793
7PJT|1|A|A|794
7PJT|1|A|C|795

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2

Chain E

50S ribosomal protein L4

Chain S

50S ribosomal protein L22