3D structure

PDB id
7PJU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)
Experimental method
ELECTRON MICROSCOPY
Resolution
9.5 Å

Loop

Sequence
GGAUGUUG*CAUCAUUUAAAGAAAG*CUCAC
Length
29 nucleotides
Bulged bases
7PJU|1|A|U|1061, 7PJU|1|A|A|1084
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PJU|1|A|G|1055
7PJU|1|A|G|1056
7PJU|1|A|A|1057
7PJU|1|A|U|1058
7PJU|1|A|G|1059
7PJU|1|A|U|1060
7PJU|1|A|U|1061
7PJU|1|A|G|1062
*
7PJU|1|A|C|1076
7PJU|1|A|A|1077
7PJU|1|A|U|1078
7PJU|1|A|C|1079
7PJU|1|A|A|1080
7PJU|1|A|U|1081
7PJU|1|A|U|1082
7PJU|1|A|U|1083
7PJU|1|A|A|1084
7PJU|1|A|A|1085
7PJU|1|A|A|1086
7PJU|1|A|G|1087
7PJU|1|A|A|1088
7PJU|1|A|A|1089
7PJU|1|A|A|1090
7PJU|1|A|G|1091
*
7PJU|1|A|C|1100
7PJU|1|A|U|1101
7PJU|1|A|C|1102
7PJU|1|A|A|1103
7PJU|1|A|C|1104

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain 5
50S ribosomal protein L10
Chain I
Ribosomal protein L11

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2825 s