J3_7PKQ_001

3D structure

PDB id

7PKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Small subunit of the Chlamydomonas reinhardtii mitoribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GGU*AAGCCGAAGG*CAC

Length

16 nucleotides

Bulged bases

7PKQ|1|3|A|176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PKQ|1|3|G|125
7PKQ|1|3|G|126
7PKQ|1|3|U|127
*
7PKQ|1|3|A|169
7PKQ|1|3|A|170
7PKQ|1|3|G|171
7PKQ|1|3|C|172
7PKQ|1|3|C|173
7PKQ|1|3|G|174
7PKQ|1|3|A|175
7PKQ|1|3|A|176
7PKQ|1|3|G|177
7PKQ|1|3|G|178
*
7PKQ|1|3|C|185
7PKQ|1|3|A|186
7PKQ|1|3|C|187

Current chains

Chain 3

S3 rRNA

Nearby chains

Chain 4

Small subunit ribosomal RNA; SSU rRNA

Chain f

Mitochondrial ribosomal protein S6

Chain r

bS18m