J3_7PKQ_004
3D structure
- PDB id
- 7PKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Small subunit of the Chlamydomonas reinhardtii mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CAUUG*CGAAUAUAC*GAAG
- Length
- 18 nucleotides
- Bulged bases
- 7PKQ|1|4|U|128, 7PKQ|1|4|G|161, 7PKQ|1|4|A|167
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PKQ|1|4|C|125
7PKQ|1|4|A|126
7PKQ|1|4|U|127
7PKQ|1|4|U|128
7PKQ|1|4|G|129
*
7PKQ|1|4|C|160
7PKQ|1|4|G|161
7PKQ|1|4|A|162
7PKQ|1|4|A|163
7PKQ|1|4|U|164
7PKQ|1|4|A|165
7PKQ|1|4|U|166
7PKQ|1|4|A|167
7PKQ|1|4|C|168
*
7PKQ|1|4|G|245
7PKQ|1|4|A|246
7PKQ|1|4|A|247
7PKQ|1|4|G|248
Current chains
- Chain 4
- S4 rRNA
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain g
- uS7m,Ribosomal_S7 domain-containing protein,Ribosomal_S7 domain-containing protein,Ribosomal_S7 domain-containing protein
- Chain m
- Mitochondrial ribosomal protein S13
- Chain u
- Plastid-specific ribosomal protein 4
- Chain x
- mS29
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