J3_7PKQ_006
3D structure
- PDB id
- 7PKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Small subunit of the Chlamydomonas reinhardtii mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- UAGAGAUGCG*CGAGUAA*UGAAGGUAACCUCUA
- Length
- 32 nucleotides
- Bulged bases
- 7PKQ|1|4|U|290, 7PKQ|1|4|A|292
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PKQ|1|3|U|344
7PKQ|1|3|A|345
7PKQ|1|3|G|346
7PKQ|1|3|A|347
7PKQ|1|3|G|348
7PKQ|1|3|A|349
7PKQ|1|3|U|350
7PKQ|1|3|G|351
7PKQ|1|3|C|352
7PKQ|1|3|G|353
*
7PKQ|1|4|C|255
7PKQ|1|4|G|256
7PKQ|1|4|A|257
7PKQ|1|4|G|258
7PKQ|1|4|U|259
7PKQ|1|4|A|260
7PKQ|1|4|A|261
*
7PKQ|1|4|U|284
7PKQ|1|4|G|285
7PKQ|1|4|A|286
7PKQ|1|4|A|287
7PKQ|1|4|G|288
7PKQ|1|4|G|289
7PKQ|1|4|U|290
7PKQ|1|4|A|291
7PKQ|1|4|A|292
7PKQ|1|4|C|293
7PKQ|1|4|C|294
7PKQ|1|4|U|295
7PKQ|1|4|C|296
7PKQ|1|4|U|297
7PKQ|1|4|A|298
Current chains
- Chain 3
- S3 rRNA
- Chain 4
- S4 rRNA
Nearby chains
- Chain e
- S5 DRBM domain-containing protein
- Chain g
- uS7m,Ribosomal_S7 domain-containing protein,Ribosomal_S7 domain-containing protein,Ribosomal_S7 domain-containing protein
- Chain i
- 30S ribosomal protein S9, chloroplastic
Coloring options: