J3_7PNX_002

3D structure

PDB id

7PNX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GAUU*AUUAACCU*AGC

Length

15 nucleotides

Bulged bases

7PNX|1|A|A|688, 7PNX|1|A|C|828

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PNX|1|A|G|687
7PNX|1|A|A|688
7PNX|1|A|U|689
7PNX|1|A|U|690
*
7PNX|1|A|A|823
7PNX|1|A|U|824
7PNX|1|A|U|825
7PNX|1|A|A|826
7PNX|1|A|A|827
7PNX|1|A|C|828
7PNX|1|A|C|829
7PNX|1|A|U|830
*
7PNX|1|A|A|856
7PNX|1|A|G|857
7PNX|1|A|C|858

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain J

28S ribosomal protein S12, mitochondrial

Chain M

28S ribosomal protein S16, mitochondrial

Chain T

28S ribosomal protein S25, mitochondrial