J3_7PNX_010

3D structure

PDB id

7PNX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CAUUU*AAACUAC*GGUG

Length

16 nucleotides

Bulged bases

7PNX|1|A|U|1369, 7PNX|1|A|C|1385, 7PNX|1|A|U|1386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PNX|1|A|C|1366
7PNX|1|A|A|1367
7PNX|1|A|U|1368
7PNX|1|A|U|1369
7PNX|1|A|U|1370
*
7PNX|1|A|A|1382
7PNX|1|A|A|1383
7PNX|1|A|A|1384
7PNX|1|A|C|1385
7PNX|1|A|U|1386
7PNX|1|A|A|1387
7PNX|1|A|C|1388
*
7PNX|1|A|G|1418
7PNX|1|A|G|1419
7PNX|1|A|U|1420
7PNX|1|A|G|1421

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain F

28S ribosomal protein S7, mitochondrial

Chain X

28S ribosomal protein S29, mitochondrial