J3_7PNY_001

3D structure

PDB id

7PNY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

CUCU*ACCCCAG*CAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PNY|1|A|C|677
7PNY|1|A|U|678
7PNY|1|A|C|679
7PNY|1|A|U|680
*
7PNY|1|A|A|866
7PNY|1|A|C|867
7PNY|1|A|C|868
7PNY|1|A|C|869
7PNY|1|A|C|870
7PNY|1|A|A|871
7PNY|1|A|G|872
*
7PNY|1|A|C|917
7PNY|1|A|A|918
7PNY|1|A|A|919
7PNY|1|A|G|920

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain J

28S ribosomal protein S12, mitochondrial

Chain O

28S ribosomal protein S18b, mitochondrial