J3_7PNY_006
3D structure
- PDB id
- 7PNY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- UGUAAUC*GAUCAACCUCAC*GCAA
- Length
- 23 nucleotides
- Bulged bases
- 7PNY|1|A|U|1229, 7PNY|1|A|C|1230, 7PNY|1|A|A|1232
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PNY|1|A|U|1210
7PNY|1|A|G|1211
7PNY|1|A|U|1212
7PNY|1|A|A|1213
7PNY|1|A|A|1214
7PNY|1|A|U|1215
7PNY|1|A|C|1216
*
7PNY|1|A|G|1227
7PNY|1|A|A|1228
7PNY|1|A|U|1229
7PNY|1|A|C|1230
7PNY|1|A|A|1231
7PNY|1|A|A|1232
7PNY|1|A|C|1233
7PNY|1|A|C|1234
7PNY|1|A|U|1235
7PNY|1|A|C|1236
7PNY|1|A|A|1237
7PNY|1|A|C|1238
*
7PNY|1|A|G|1351
7PNY|1|A|C|1352
7PNY|1|A|A|1353
7PNY|1|A|A|1354
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain H
- 28S ribosomal protein S10, mitochondrial
- Chain K
- 28S ribosomal protein S14, mitochondrial
- Chain a
- Putative ribosome-binding factor A, mitochondrial
- Chain b
- 12S rRNA N4-methylcytidine (m4C) methyltransferase
Coloring options: