3D structure

PDB id
7PNY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b
Experimental method
ELECTRON MICROSCOPY
Resolution
3.06 Å

Loop

Sequence
CUUCAG*CGCAAGU*AAAGACG
Length
20 nucleotides
Bulged bases
7PNY|1|A|U|1270
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PNY|1|A|C|1268
7PNY|1|A|U|1269
7PNY|1|A|U|1270
7PNY|1|A|C|1271
7PNY|1|A|A|1272
7PNY|1|A|G|1273
*
7PNY|1|A|C|1302
7PNY|1|A|G|1303
7PNY|1|A|C|1304
7PNY|1|A|A|1305
7PNY|1|A|A|1306
7PNY|1|A|G|1307
7PNY|1|A|U|1308
*
7PNY|1|A|A|1317
7PNY|1|A|A|1318
7PNY|1|A|A|1319
7PNY|1|A|G|1320
7PNY|1|A|A|1321
7PNY|1|A|C|1322
7PNY|1|A|G|1323

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 1
28S ribosomal protein S35, mitochondrial
Chain C
28S ribosomal protein S24, mitochondrial
Chain D
28S ribosomal protein S5, mitochondrial
Chain G
28S ribosomal protein S9, mitochondrial
Chain H
28S ribosomal protein S10, mitochondrial
Chain K
28S ribosomal protein S14, mitochondrial
Chain a
Putative ribosome-binding factor A, mitochondrial

Coloring options:

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