J3_7PWG_011

3D structure

PDB id

7PWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

UACC*GUC*GUUCAA

Length

13 nucleotides

Bulged bases

7PWG|1|1|A|2309, 7PWG|1|1|C|2310, 7PWG|1|1|U|2354

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWG|1|1|U|2308
7PWG|1|1|A|2309
7PWG|1|1|C|2310
7PWG|1|1|C|2311
*
7PWG|1|1|G|2336
7PWG|1|1|U|2337
7PWG|1|1|C|2338
*
7PWG|1|1|G|2352
7PWG|1|1|U|2353
7PWG|1|1|U|2354
7PWG|1|1|C|2355
7PWG|1|1|A|2356
7PWG|1|1|A|2357

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain B

Ribosomal protein L3

Chain O

Ribosomal protein L13a

Chain V

Ribosomal protein L23